The Bruggeman lab

Teaching

On this page you find additional information for some of the courses that we are involved in:

Introduction to Systems Biology

The lecture notes that I wrote for this course: sb_nutshell_book book.pdf. [last update: 09 Nov 2015]

Some material used in the lecture notes:

1. The metabolic map of Synechocystis spp. PC6803 growing on glycogen: Synechocystis_glycogen

2. The metabolic map of Synechocystis spp. PC6803 growing on carbon dioxide:  Synechocystis_hco3

If you want to make such maps yourself then run simulations at http://f-a-m-e.org/synechocystis/ and see also http://vonda.sourceforge.net. I thank Timo Maarleveld for the development of the Synechocystis maps.

Modelling for Systems Biology

You can find these lecture notes as a zipped pdf file at: book.pdf [last update: 15 Nov 2015]